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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.9458, orf1...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKRKSVKG GVEPKNKKVK TAIHQKEPNT LLSLEELTNL SKEIDESLKF NNLVPLLEQF  60
   61 KLIKTKLIES IDPDVESTAR KLSLLLYRNF NKINDEIISN GNGAKSSASE DKKMIIKWLS 120
  121 EKYTTFKDII YGFIEDKLAG STSLQLDLLD IILNFIRLES QRKSSTSQVV FFPTQSYKSL 180
  181 TESILNSKNG EISFDGTTDN FIVLEFLDKF QKYWDLQFYF FNNLSEVLNE WKQEKSEKDL 240
  241 QLIFANFLTV LRKGLLFNEK TLEEEPLWIA PNKEGKLPSS LYKHTLFKSQ FQKSVIAMLS 300
  301 YPLLQEQYKS VLTILHKRII PYMSQPQSLM DFLTDCYDLT DDLIVPILAL NSLYELMKNY 360
  361 NLEYPDFYSK LYSLLTPELL YTKYRSRFFR LCDLFLSSTH LSANLVASFI KKLARISLAA 420
  421 SASGVVIIIP FIYNLLKRHP TCMIMLHKED TESGYQDPFN SEEKNPLHTE AIKSSLWELD 480
  481 TLMTHYHPNV ATLAKIFGEP FRKPSYNMED FLDWSYNSLL QSEYDRKFKD KNSALEFEEF 540
  541 DKVLDTSNSD SKSSLLEGWT LV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle