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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.1887, orf1...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEENPPQQD QQAPNVSDKP QGDSLITPRE THFHNVFVKY LIMLISALGS VIYTTVLCTG  60
   61 SILNHWFDIV SGREKTVLAD IEQRSHGYVP REPYDELSKM KPTSDLQYYL QQLNLDLQEY 120
  121 RVTTCDGYIL TLHRIIDPRE SEEQRQQRKP VLLQHGLLSC SGTWIVSGKN SLGYYFHEQG 180
  181 YDVWMGNNRS WFIPQHKTLS GSLYNNEQYW DWGVQELAYH DLPALISTVL ANKKYFQKLV 240
  241 LLGHSQGGLQ SFLMLKNPRL GEIHEKVELF CPLAPAVYPG KLFYTRQFIK FINNRSEFMW 300
  301 LILFGCCAFL RNLCLVRHYI ASSWLFGKLS YYMFKYLFGW TGRNWGPYKK VWHFCFIFNM 360
  361 SYASVELMKY YLSKHSDCGF TTLLQPKAAY SSDAHFTENV TDDKKSYFQF DTTWFSGIKV 420
  421 PMIVFIGDED FLVDGEKVVA HMRKYEPGYR EGSNFEAVSI PTYNHLDIVW AEDVIGTIGY 480
  481 TICNKLKQMK ARDVQEGLTS ESKEQAVTIP EGSSGHHQQQ EEVGLNEKIV SVSEDIHDTE 540
  541 LTTKVKHNLS ADIPLTETRK LTTTEVF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle