YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.1160, orf1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLQLLSYIG AIVGFVLLVL SIASGLYYIS ELVEEHTEPT KRLLKKLIYS IIVTFVLLLI  60
   61 FDRFPVKLTL FSIFSYYVYL QNLHKFPYVE LSSPVFLLSC VLVISNHFLW FHHFNNPYIP 120
  121 PLEVRLRPDY VPPRIPTFVE ICSFFGLLVW LVPFALFVSL SAHDNLLPHH LDKPDDKKKN 180
  181 NGLAKVLVGN LREYIYAISR KFGYELDPHH GSIVY

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.77
Transmembrane Helix	8	29	0.95
Cytoplasmic	30	46	0.79
Transmembrane Helix	47	66	0.89
Non-Cytoplasmic	67	90	0.71
Transmembrane Helix	91	111	0.89
Cytoplasmic	112	134	0.71
Transmembrane Helix	135	158	0.84
Non-Cytoplasmic	159	215	0.77