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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.14166, orf...
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTIPSEDK KPLLDSEMEP EVSVNNNEEL PPYSDNEKHS LLSDNEKCDL EEVPTSYRVT  60
   61 RHSNKFKRFC QILSLFGVLY LVNFLYINRD DFARGMSTHF RFNCGSLVSQ QPLQETKLDH 120
  121 HPIFRNLIDV VDTTYSDQQE GNNTAKEIIS VTNPYTPNPR YGESLYTTTL IKNHKFGNSW 180
  181 NQPAVVNFTA PSNISFDAVV LTLHTEVEGV QFDRLANLFV DGIQVWRTST IEPGGRKVFS 240
  241 DFKKDVSKYS KLFKKENVQI LFQLDNLVTS KLTGIFDVTL TADFYKFHRH PHYRDGKNEH 300
  301 NEKRYGHEDK LNEFYEEQND QDYEKEFIDS FEHHRGDFQE DEKNHHDDHH KDKHHKGKHH 360
  361 KDDKHHKDKD GKPKKPEHPP HEPPHEPPHE PPHEPPHEPP HHPPHEPPHE PPHKPPHEPP 420
  421 HEPPHKPPHE PPHKPPHEPP HKPPHEPPHH PPHHPPHHPP HDPHDPNHHH GKYHEERRIF 480
  481 TEAKPADEIY PLTFNKNPNQ APVVYLASNK LSVNLPKVSK NTTRLTLSIF TSGNAADEFW 540
  541 YTNVVDKYKD IFADRGNPFI GKGPVRVVNV YFNGEKIAAQ TPEPVIFTGG ISPALWSPVV 600
  601 SFNAFDVPSI DVDVSGLLPY LWEHQAIEDK ILEIEVSNGL GEIDKDTTTS VNENWVTSAN 660
  661 LLTYQNDQVI DATGEVINID NESSEVVLTV APPYTRSLQQ IIDASFSAQL ISQFSLTLKN 720
  721 NRTLNTTISS YSKAEVSNVQ SYSRSGDIQS IVHAGRSSRS VLIQDNDSPE SKDVTEHKSK 780
  781 HRKSEIPENT ISIVNITLNY PLVLHLQQIS KDIGSGDDFF VDYDVRLAHS KSTDITFGAI 840
  841 HGGIHTTTSQ NGTSRFFLSS KGNHGFGSTF SKYKSKIKFG PHQRKYKRVV NAVNGTIVLD 900
  901 KSKSGKDDEH GKTHLSSMMK AMEKTSVYKN ASEMLQSIVN ASKASFKEFL GAKPGCHGMK 960
  961 HHENEDGHKK MKHKMRKHLS DAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle