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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_CANAL
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSEGELSH TSSSSSFVPV DQRQLQDAIQ IIDENKHFNT GILDYINKTS PADVGNNYHI  60
   61 ISVFGSQSTG KSTLLNRLFN TNFDVMDESN RQQTTKGIWL AYSPVVSTTL GHTTSKSNIL 120
  121 VMDVEGTDGR ERGEDQDFER KAALFALSTS EVLIINIWET QVGLYQGANM GLLKTVFEVN 180
  181 LSLFGKSKLE THNDHKVLLL IVIRDHVGVT PVESLAKTFT SDLQNMWSSL AKPAELEHLQ 240
  241 FADFFDVTFH ALNHKVLQPK EFGEGINRLD DRLVVSNELF KPEYHHDVPI DGWTMYAERC 300
  301 WEQIETNKDL DLPTQQILVA QFKCDEIVES VFQEFLAKYQ HHFKEVDAAP DFEELGALFA 360
  361 DLRQDAFEDY DASASRYNKA VYEQKRKKLR WLINDKLKEV FDVHAKNLCN TLLEKFEKDL 420
  421 VALKGKDFAV NVKTLSTKLV EDVNFQVSLM SLQGDLSLDE IILALTKDID AIVAKQQVIE 480
  481 LNSIVNKSVK KLSASLSKSI QFELGDPNEE TWDNVLQQFK GVYEKFGGDF GLGTSSTQNQ 540
  541 QAIEKFKFKS WCQFYDVTHK LISREKLLAL LQDRFDDKFR YDENGLPKLY LNEQDLEKTF 600
  601 AVAKQHALQV LPILTFAKLA DGSEIVPDYD IFDSKLREQF LGGYDDSDDE EDHCFAEIIT 660
  661 EQEKSEVLAK FKKEVDAKYI ETKRSIVQHI TQIPYYIYLI ILVLGWNEFM AIIRNPLFFS 720
  721 LSIVLGATVY VLYYLGLLRP ALVVAQRTMD EVIVMAKTKL REVLIDDHEV TGRQLNKMAG 780
  781 SKENIELDDM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle