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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6124, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHWKFSNFRK YHLSFHLNLF DLSLFFISFY CFPILYICFF NQVHSFRSTQ PSLIMNKFDL  60
   61 FDDYSTKGST IPLPNENFDQ LFLSSEANDM EFLFNETLMG LQDLDVPSGY GIPQNTINND 120
  121 FQHTPNKSKS HSRQYSGTAI FGFADHNKDL SINGVNNDLC KQSNKAINTQ SVSPGELLKR 180
  181 SRGSQTPTPT SALPDTAQDI LDFNFEEKPI LLLEEDELEE EKHKQQQRMM TQSSPLKRVT 240
  241 TPSQSPFVQQ PQTMKQRKPH KKTNEYIVAN ENPNSYKFPP SPSPTAKRQQ YPPSSPIPYN 300
  301 PKSDSVGGNS YSAKYLQSLN KTQQIEYVDD IEPLLQEDNN NMKYIPIPVQ EPMSYQKQKP 360
  361 VTPPLQSQND SQQLEPLKTP QPQPKQQQQQ QQPNNEQDKE FTANINFNTF LPPPTPPNLI 420
  421 NGSPDWNSSP EPHSPSPGRL QPPQQISPIH QNLGAMGNNI NFYTPMYYEL PVQAEQPQPQ 480
  481 PQPHQQQHQQ QQHQPELQNT YQQIKHIQQQ QQMLQHQFHN QNNQLRQQHP NQFQNQNQNQ 540
  541 NQNQTKTPYS QQSQFSPTHS NFNLSPAKQL NSNVGSMHLS PLKKQLPNTP TKQPPVTIEW 600
  601 SPVISPNSKQ PLHKQIKESS PRRRIKKTSL LPPGELDNYW TGPDEDKIYT CTYKNCGKKF 660
  661 TRRYNVRSHI QTHLSDRPFG CQFCPKRFVR QHDLNRHVKG HIEARYSKCP CGKEFARLDA 720
  721 LRKHQDRNIC VGGNKNVISK PTKKKGTNNT QQQLLKTDTV VERIEKQLLQ EDKSVTEEFL 780
  781 MLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle