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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.14153, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEKEEAVFR SADMSLVQLY VPTEVARDII YKVGQLDIIQ FRDLNSKINE FQRSFVKELR  60
   61 KLDNVERQFN LFKRELDVRD IPIKLFPYDL DNVPPQTEID ELIEGSDLLE ERVIQLRDSV 120
  121 ETLYEKEKYL KQFKYTIQAV NNFFAVQGET TNDNEETALL SQLESGGATS GGGGDARSGS 180
  181 SFISGVINRD KVGVLQQILW RVLRGNLYYH NEDLPEEIYD FKNNTYVAKS SFIIFSHGSL 240
  241 IRERIRKICE SLDAELYNVD STSALRREQL DDVNTKTTDL STVLGESENA LNSELIAISR 300
  301 DLAKWWEIIA REKAVYKAMN NCDYDNSRKT LIAEGWTPTD SITELTTAIQ EYDASQSVPT 360
  361 IINVLDTNKT PPTYTRTNKF TYAFQAICDA YGVPKYKEIN PGLPTIVTFP FMFAIMFGDL 420
  421 GHGFIVTLAA AALVLNEKKL NAMKKDEIFD MAYTGRYVLL LMGVFSMYTG FIYNDVFSRS 480
  481 MSIFKSGWEW PEKFNVGETI YAKYVGTYSI GLDPAWHGTE NALLFSNSYK MKLSILMGYI 540
  541 HMSYSYVFSL VNYTYFNSMI DVIGNFIPGL LFMQGIFGYL SLCIVYKWSV DWFATGRQPP 600
  601 GLLNMLINMF LQPGDVPEPL YSGQSTIQVF LLLIALICVP WLLLVKPLYM KRQLEKEANQ 660
  661 HHGSYSQLAN DEESGVAGQE QEQENAAEDD DEDHEEHNFG DIMIHQVIHT IEFCLNCVSH 720
  721 TASYLRLWAL SLAHAQLSTV LWSMTIGNAF GPTGLIGTFM VVFLFAMWFV LSVCILVVME 780
  781 GTSAMLHSLR LHWVESMSKY FEGGGSAFEP FTFKGLLDSV L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle