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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6648, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKRRAAIL PTNIILLQNV VRRDPESYHE EFLQQFSHYE SLRDLYLINP TGVDANSTTE  60
   61 FIDLIGFMSA VCNCYPKETA NFPNELKEIL LNNHRDLTPE LREKIIQCLT MLRNKDIISA 120
  121 EMLIQTIFPL LITSNAGQQV KQMRKQIYST LIALLKSVNT GTKNQKLNRS TQALLFNLLE 180
  181 QRDNQGLWAT KLTRELWRRG IWDDSRTVEI MTQAALHPDV KVAVAGARFF LGADKEREDN 240
  241 FEESSDEDGF DMNELRHKMQ INKKTSKRGK KLEQAVKAMK KKNNSKHSAT YLNFSAIHLL 300
  301 RDPQGFAEQM FDNHLSSKNS NKFDLDQKIL FMNLISRLIG THKLIVLGVY TFFLKYLTPK 360
  361 QRNVTQIMAA AAQASHDLVP PESIQIVVRK IADEFVSDGV AAEVASAGIN TIREILARAP 420
  421 LAIDAPLLQD LTEYKGSKSK AVMMAARSLI SLYREVAPEM LLKKDRGKVA SIELQKGEKS 480
  481 GLPQYGVENN VTSIPGIELL AKWKKEQGLD SREDEEDDAN WEVDDDEDAS DIEGDWIDVE 540
  541 SDKEINISDS DDDNEEDEQE QEPEKGKAKI GKAEDNEDEV SDLELSSDDD DEDSEENKDG 600
  601 KAVADSEEPP TKKQKIRNEN ADINAEQAMN ELLSSRILTP ADFAKLEELR TEAGVSKIMG 660
  661 ISNEEAVDST SLVGKVKYKQ LREERIAHAK EGKEDREKFG SRKGKRDTPH STTNKEKARK 720
  721 KNFVMMIHKK AVQGKQKLSL RDRQRVLRAH ITKQKKKGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle