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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6598
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAHTTFLSF FLSLFHFNQS STTTLSLISI LLNLQYFILF RKQQLQQQQQ QQQQQQRPTP  60
   61 YSPLKTTTMG ILTTQDKEKV KRAIPKANNK IIDATVARLY IAYPDPTKWA YTGLVGAIAL 120
  121 VDDLVGHTFF LKLVDIIGHR GVVWDQELYV NFEYNQDRKY FHTFEIEECF VGLLFEDTND 180
  181 ATHFYKRVTT RQKYGSSATV KNKSAIALKE RIGSNKSYEI PGPRGEFMDV NTAQRQRRAK 240
  241 GVLYYDDVPP PEWRSLYAEL EAAGITEDMI ADNRQFIKDY ISQQGGPLVG LEPPIPRKFQ 300
  301 RKHEIEHSMA IAEPLTVSIS SSSSNTTSKH KKAPPPPPPP PPSGPTSQQQ QQQQQQSTTV 360
  361 DHHYPSNESK EPSYSPSPSP TSTSTSTPEP ESHEITPAKP RFRLPPSTAI APPVRNTSLP 420
  421 PNGPQFIDKP LPKVPLPLSP VSPQAPNHAY PTTTNTNTNT NTPFNHSVHQ VPPPPPARAT 480
  481 PPAPPPRART NQLGLPPRNT PGLPPRTNNT QPPPAPPPRA SRGAVPPPPP PPPRATRAPM 540
  541 QLQLQSSPQS SPISPPAQQQ QQQQYPSIPP RENTSAIISS PPPAPPLPQQ PRPTIATPQQ 600
  601 QQQQLPQATT SSVASPAPPL PPQMNQTTQQ TPATTTTTTT TTTPSIPAPP PPPPAPPMPD 660
  661 MSNDTSTSAN TGGGISEATG DAGRDALLAS IRGAGIGVLK KTDKSQLEKP SILLQEAKGE 720
  721 TPQINSNTGT SSNAPPATLA DAPPATLADA PPATLADALA SALNKRKEKV AQSDDEEDDD 780
  781 W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle