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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6594
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLNIIVVL FLSIYTNPII AWSPTDSYAP GEIQCPSNSS LTRNADSLSP QEQEWLKGRS  60
   61 PIANENLISF LNSANMTDFD PESFINGLNR SIKIGLSFSG GGYRAMLNGA GQLAALDNRT 120
  121 RGGFESGLGG LLQASTYLVG LSGGNWMVGT IAYNNFTSVQ HILDQDSIWD LSHSIMNPGG 180
  181 WNIKKTYNYY KNISDALDDK RNAGFDVSIT DTWGRALSHQ FFPGLDDGGD ALTWSTLQDV 240
  241 DVFKNYEMPF PIVVADGRTP GTYVISGNST VFEFNPFEMG SWDPAVYQFS QVKYLGTEVK 300
  301 DGKPSSNGKC IGGFDNAGFI MGTSSSLFNQ FILQINTTSL SSTIKSLLTS ILQDLSNDDN 360
  361 DIAVYKPNPF KDSDVAGSKS IASNDTLYLC DGGEDLQNIP LYPLLQEQRQ VDVIFAYDNS 420
  421 ADTNQYWPNG ASMVASYQRQ FGNQSNGTSF PYVPDVATFV NSNLTAKPTF FGCDAKNLTS 480
  481 LTTTQNKTSV YDIPLLVYTA NRPFSYWSNT STFQMKYETK ERNAIIQNGF EVATRMNLTL 540
  541 DNEWKACVGC AIIRRQQERQ GLEQSDQCKK CFEKYCWDGK LTTNADAINI NFTTEGTTND 600
  601 TESMKVNSGV LTSVSWSLWA MMLAALSVFI LG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle