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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11687, orf...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLSIFSLV FLFFSTLITA KTHTWYYKTG WVNANPDGGF ERPMIGFNDS WPLPTLRVKK  60
   61 GDTVNLYLIN GFDDRNTSLH FHGLFQHGTN QMDGPEMVTQ CPIPPGETFL YNFTVDDQVG 120
  121 SYWYHSHTSG QYGDGMRGVF IIEDDDFPYD YDEEVILTLG EHYHDFSDDL HKNFMSRYNP 180
  181 TGAEPIPSNI LFNETRNNTW KVEPGKTYFV RIINIGRFVS QYVWMEDHEF TIVEVDGIYV 240
  241 EKNTTDLIYI TVAQRYGVLI TTKNSTDKNY AFMNRVDIDM LDVIPDELEL NGTNYIEYNS 300
  301 KADKPEPYLL DSIDDYFDDF YLKPLSKEKL LDDADYTITV DVQMDNLGNG VNYAFFNNIT 360
  361 YTTPRVPTLL SVLSAGDDAS NELVYGTNTN SFVLQSGDVV DIVLNNLDTG KHPFHLHGHV 420
  421 FQLIERHEEI PETEDPVGYN ASDHADWPEY PMLRDTVYVR PQSYIVMRFK ADNPGVWLFH 480
  481 CHIEWHLDQG LAIQLIEDPQ GIQKNTSQHI TDNHKQICEK VGVSWEGNAA ANSKDYLNLK 540
  541 GENVQHKRLP TGFTARGIVA LVFSCIAGVL GLATIAYYGM NDIADVEERV ARDLDVDFDE 600
  601 EDNEIVNEGS SSSGSNSKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle