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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.11679, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTFSREFTK VYDYQALFNK VLNKRLRFVL NINLILSFIL ALVYEFMPMA NSNSDTNHSI  60
   61 WQSIPVLICV KVPTIFFTLS VIRQVRKQFL IVEYSHHKTL GAQIYYSILS FQFLINWLGY 120
  121 LISSWLIFGV VIIFTSKLKF NLSDYYILSK EYRQHPIIND QWVYYWYNPV FISFFYTCNQ 180
  181 LIFQRQRLNF EIGNIRNKPQ NYLFKHLPIL LGNSLGLNLF VISLTPITYW LVKYYIYKSF 240
  241 ILIILIFRLD SDIIPNNNTS WITYLQLSYL SFFIILSWEV VNHVFNVYAT IGCLDGNKPI 300
  301 SSYSTDPLNC LLSGLRDVDP NYQLSRLTAF QELAYLATSS EKEALKLRFK IFSFRSKKLN 360
  361 AWTSLLEECA LVIKETTDRI NYRSTSDLNA LKSLEISGLK GNINNYRDSK QNSDNLFGNS 420
  421 FINTSPVDKK SSELIKKYQA NTSTTAEGKK KSNKVQELIG SIQHFASQFF GNFQKTIGDA 480
  481 NQLQEKFAKS FNFKHYLQIY QNYKDKFLQT YIGIFFRITI KRDNESRIIN PINFCNSIIA 540
  541 ISNLLQYSIE EDKYDIISND DVCKVLNLLE KPIRATTNYI DYLPASVYVP QNSQPKKHSC 600
  601 LMGKLHDLSM HEFYEICIRF NGKLNDLILT PRTYKLVKWV IDKEIAIQQE IQKQKHQKLN 660
  661 LK

YRC Informatics Platform - Version 3.0
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