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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3212
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPPFILLLF LIMNSSYCEP FEFDFFQNLD PSTNLTEIIN NNNNSISNNV FKVQNFDSKS  60
   61 SSSSSSSSSS GEGLQEFTPI RDTIIQSETK YYSFSVNTKS GIGDFYELLI FLSGNICTQP 120
  121 SNLLENDTSL AVYYSFNSTM FTNNEIGQMQ LFKDGFFQGL ADLPLTETTT TTNNDTTTTT 180
  181 VPEKILYIAV RAPENTNRTA QWTYQIGVSQ HDLVFQWDDR SWGSIVDVDD NSALIVTGNL 240
  241 TKLSSGNYSD LNATNSQFSL YLYSYDNKDY FQGMNNSWCA VRSGPVLVKP EEIETKFIAR 300
  301 HGSIQQQFMV NNLNASTKYI AYIVMDFEGV EYGGAVLRPF EFETMDGTAC ELIYDLEFCD 360
  361 QVAYSVPAIG NSSLLASSIA GADNKTLTKK LYDDYAKSLY TNFSKGLQQI ACDTVPEAIY 420
  421 SNLKSCQDCA QSYKNWLCAV TIPRCSTKNF TGYIHRNETN QRNEFLADVI QPNQDYYEVL 480
  481 PCVNVCQAIV RDCPANFGFL CPTKNDSIKL SYYWDVHVSD QWPSCNYLGP LKSSKSGAIK 540
  541 LIINWTIVVV SFTLMVVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle