YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.54, orf19....
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAWLRHRIR SYNTSTYSSI LPSASFGKVY KIGTKLNFTL LALCLLLACS VFFNYFYLAD  60
   61 NNGLDIDTKG EEEENVFKDR KMVIFPNNFE ITDKNLLEYY LKTLEEPLHP QDTIYRNRFI 120
  121 YKVPDVSYTS QTINLFSGLS QNSQSSKCED LSSSYSFDVS GPQNKNCDLY KVLGKFLNDN 180
  181 SEYFQEISPL FPKLKEMLVK KEIEKHWFQL IGSSVWLEQY GVHLMTSRIF YSSTGDKVKP 240
  241 VVSLTYVQVF DHEWREIENV ELIVPDGEGK YKPMTYPTFL PMSVYHNEKQ QQGRFYGVED 300
  301 PRITLVRNKL GYDEPIIVYN SHHRKITDAK SDNDGESNIH FKAYRSIFMA WLWQNQKGKN 360
  361 NVEEIETGKM KNRVYVKSKE LIKPNNKRED KEKNWAPFIN YQQRLQQGFD SHVYFMYQFQ 420
  421 DLKILKCSLL DEEDCVWEYQ FNDKNGAGRL RGGTELVNIN QLLTTFDHPE IKRVKDLMPQ 480
  481 NREIWIGVAR AALEKCGCGD KMYRPNIVIL IKDGDDQYRL SHVSPFVGLG ILILPWWPDK 540
  541 GLCDGKNLII PNGISSWHLN KDEDNSVQDY LTLSISRADS TVDLLHIKGL LKSILFDDPN 600
  601 SKLLELNDYG FNNKNIECAV KSSDAFCKKY GSEYKLNNNK EEDKANGNGK GSSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle