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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13273, orf...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTHKRVPQH EEYELVNQVP PTQSPTDSPT RSESDFRNST DSQLSDIFED LENYSGSSGQ  60
   61 KIEDFNDSPL FQSVLMRYKN EGISGRTCGI FSLVAIFLWI GSVIIYSRVN HSTIGNDLTW 120
  121 KTNIIQLNGE NITLNEYNPN FKNITMNDWR KGKYHTFEKQ IRWLTSKQSP KSKHGGGFYV 180
  181 LDEHDKIVVN QIGQVDKSDT FLSNKQFEYG NNFFKIQDFI LNPSQSIEDS EVVHIIITDT 240
  241 VHQWRHSSFA LYWLFKPLVG TYTPIQPPRN NNKGNGLEVD ALDKLHYADF SSDGKYIVFG 300
  301 FEHNLFIQDL ATGEIQQITD DGSPNIINGK SDWIYEEEVI ASNKMIWWSP SGNHFIFAKI 360
  361 NETKVQEVDM DYYTKQNTNI GMQYQQVGES KYEGVNQYPI NTQLKYPKPG TSNPILSLYI 420
  421 YDIANKKTEE IIDGDDNLGT EYILYYAKWI DANSFLMKQS DRTSSVLTKK LYDLDKNHVS 480
  481 IVSSSNVTKE YKGWVERMNP ITLLDDGKYI DNVVIDNRNT LALFDSPHSV SPSKVLVDNK 540
  541 DWDITGEAIY DAQEKFVYFL STVRSSMDAH LVGIDLADNY KLYNITDTKK DGIFETKFSE 600
  601 NGQYLSLVYQ GPNQPWQRLI NMANVHDFIK SEEYGKSTIE EAVILNQPIV NSLANLKEIN 660
  661 LPTVRYKEVT IGKKEDQVTL NIMEILPPNF KAKNQKYPLF VYTYGGPGSQ TVMKKFDIGF 720
  721 LQIVSARLNS IILVIDPRGT GGKGWKFESF AKNNIGYWES RDLKTITSEY IKKNKKLIDK 780
  781 ERVALWGWSY GGFVTLKTLE YDKGEVFKYG MAVAPVTNWL FYDSIYTERY MGLPDTDPNY 840
  841 ETSARINDFD NFKSVKRFLL VHGTGDDNVH VQNLMWLLDQ LNIHNVENYD MHLFPDSDHS 900
  901 ISYDNAGVIV YDKLYYWLQN AFRGNFDELN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle