YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BTN1_CANAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	10	0.90
Transmembrane Helix	11	33	0.91
Non-Cytoplasmic	34	42	0.75
Transmembrane Helix	43	64	0.65
Cytoplasmic	65	69	0.58
Transmembrane Helix	70	90	0.91
Non-Cytoplasmic	91	98	0.52
Transmembrane Helix	99	119	0.90
Cytoplasmic	120	127	0.60
Transmembrane Helix	128	150	0.90
Non-Cytoplasmic	151	157	0.53
Transmembrane Helix	158	180	0.90
Cytoplasmic	181	245	0.70
Transmembrane Helix	246	264	0.48
Non-Cytoplasmic	265	289	0.68
Transmembrane Helix	290	309	0.69
Cytoplasmic	310	317	0.85
Transmembrane Helix	318	338	0.93
Non-Cytoplasmic	339	344	0.88
Transmembrane Helix	345	367	0.92
Cytoplasmic	368	382	0.92
Transmembrane Helix	383	404	0.71
Non-Cytoplasmic	405	426	0.75

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIISETQRT FASFFIFGLL NNILYVIILS AAIDLVGPST PKAIVLLADI IPSFSFKVAA  60
   61 PFFIHAVPYI IRLWTLVALS ATGMVLISLS PTNEISWKIL GITLASLSSG LGEVSFLQLT 120
  121 HYYEENSAIG GFSSGTGGAG LFGSFLFMVF TNVLGFPVWV VLLICAVFPS GFIITYFNLL 180
  181 PLPMHEYQVI LQQQQEREEE QEEEEYQQQL QDEARSQNIE SIREVKYSVN YISKHVQNTI 240
  241 HKITPLILPY MLPLTTVYIS EYVINQGISP TLLFPLKEVP RWLISSYRDI YVVYGFLYQL 300
  301 GVFISRSSVT MGIRIKRLYL LSVLQFINVM ITLYQSIYDL PFHSIWWLFL LIFYEGLLGG 360
  361 ASYVNTFKSV SEQVSRTKRE FSMGCVSISD SLGIVTAGCI NWWLELKLCH LQVARGRDWC 420
  421 LKGGSL