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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.558, orf19...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRVSNAPC IPVVATIDIG TTSARAIIFS AEGEEIAKHQ IEYSTTASEA PENSSNTDQF  60
   61 RRRSSLLRHD EPIFSAEGIA ITLNDNIMIE NNKSSVGPTI RFPQPGWVEC MPVHILANAV 120
  121 QCLVACLISL RKVNQDPNLK LKYKVKAIGI ANMRETTIVW SRKTGKPLSG GITWTDTRTS 180
  181 EIIQHLEKMI DEDRKAELKE KTGLPLSTYF SAAKLRWLLD NDDVIREEYE KGDGNLMFGT 240
  241 VDTWLIYHLT KEKAFVSDIT NASRTYFMDL ETLDYDDDLL DFWGIDPTKI RMPKIVSSSE 300
  301 FYGEFAAPKL DNLGFHNKIT KEAYDILKTI TGVPICGCLG DQSASLVGQL AFSAGSAKCT 360
  361 YGTGAFLLYN TGPHKLISKR GALTTFGFWF PTLKGTDGKP HYAMEGSIAV AGSIIQWLRD 420
  421 NLKMIDNAKD IGPLASQVEN SGGVVFIPAF SGLYAPYWDG GSRGTIFGMT QYTSAAHIAH 480
  481 AALEGVCYQV RAILKAMASD AGAVDDFLED ALSCQNTDKL LSTLATDGGM SKADEVLQIQ 540
  541 ADILGPCVTV KRAQTAECTA LGAAIAAGLS FKNEEDRIWK DLDDVVAKIS GSSEDVAANS 600
  601 FTAKLSDENR RKAWKRWEKA VDRAKGWLED E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle