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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10, orf19.7683
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEEISFESW YLYLIICGVL YFCTNYLYIQ YLNKKLGAKS PGSCKSDGCF GFRSGFEMLK  60
   61 AKKIGRQVDL LHERFNDLSN PEVNDTFTSY NFGFPMIITK DPENIKALLA TQFNDFSLGR 120
  121 RYDFFKPLLG KGIFTLDGEG WKHSRSMLRP QFAREQIAHV KALEPHFQLL KKHITKNKGQ 180
  181 FFDIQELFFR FTVDSATEFL FGESVSSLKD ESIGYNQDEF DFAGRKDFPE AFNKSQIYLS 240
  241 TRSLLQNLYW LVNPKDFQNC NAIVHKFSDY YVNKALNATP EELEKNSGYV FLYELVKQTR 300
  301 DPQVLRDQAL NILLAGRDTT AGLLSFAVFE LARNPQVWKK LREEIIERYA DGATEISFET 360
  361 LKQCEYLKAV INETLRLYPS VPRNGRFANK NTTLPRGGGP DGMSPILIKQ GQAVMYSIYS 420
  421 TQRDPKYYGK DADVFRPERW FEPETRKLGW AFLPFNGGPR ICLGQQFALT EASYVLVRLA 480
  481 QCCENLQLTE GIEYPPAKLT HLTMCMFDGV PIKVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle