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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58265924, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSPSLTPS RPAPVPPRRA AVTAPSILRV TDGAAAPQSN FSSTSYSPSF SYTNSSIQST  60
   61 KLVDTTRSRT IRSGAASIKE EGLRAFMWSK RWLVLGSAEL RIYKNENSPS PVYTVSLEDI 120
  121 QDVQRVDMKP YCVEIETGDK LLYFAFRSDN EVYGWMDDIY SRSPRLGVSQ PTNFVHQVHV 180
  181 GFDPKSGGFT GLPPQWSKLL TSSAITKEEA ARNPEAVLDV LQFYTQQQAG NVLEGYQQFP 240
  241 VPTVSNQSLT TGTAATRFKG VGLGGQQQQQ QQLQSVPFTA PESLEATTVV PVRPSFDTEE 300
  301 NTLAQKEKEK ILNSQHQPME SVSRPAMAKS DKEKVTWSPG PTMEKRISTM NEVQIMEKLR 360
  361 SVVSAKDPSQ LYSKIRKIGQ GASGMVFVAK TLLNGKKVAI KQMDLSQQPR KELIVNEIIV 420
  421 MRESQHPNVV NFLDAFLVRG SELWVVMEYM EGGALTDVIE NNKLEENQIA AICLETCRGL 480
  481 QHLHSRSIIH RDIKSDNLLM NTQGEVKITD FGFCAKLTDQ KSKRATMVGT PYWMAPEVVK 540
  541 QKEYGAKVDI WSLGIMAIEM IENEPPYLDE EPLKALYLIA TNGTPTLKSP EKLSQDLKHF 600
  601 LSVCLCVDVA FRATSTELLK HEFLQLACSV RDLAPLLRFK QGTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle