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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15622139, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFKATVRT DLDRNLSLKE ELVKIEGSKI RVYSDGKEIF SVDNIVKLAI ESGITIDKLV  60
   61 GYTSDGKSIE IAYFTKKKED IFKKIVDAFN RNEEIEIKDE AIEHSSRVSM STLRWLFGIA 120
  121 RKYRRRMIIG AILSLITTGL NLVPPYLLKI LIDNVLLSSS HSPSLYTDII LYLIMSYSAL 180
  181 ALVSSIQNRI LNNLGSRIIN DLREMLYNHV IKHDYSFIER ISPSRILSRL TTDAGNTNWL 240
  241 LVWGLPTLVT NLFTLIGIGV ILFTLNVTLA TYILIPIPVI IIMIIKYRRK SHRLYHRNWR 300
  301 RSADITSRIN DTIPNFLVVR SFSKENYESK TLRKLLDKLY ESSVSINKMN STYWPLMGFI 360
  361 VNLSTVIIWW IGGHEVISGI IQLGVITAFI AYVSQFYGPI NNLSNVLPFI QQSLTSAERI 420
  421 REVLELKPEI TNPENPKKPN MPAEIILDHV YFGYDPHFPV IKDVSIKIKP GEKVAIVGKS 480
  481 GSGKSTIAKL LLRFYDVNEG KITIGGVDIK EIDLNYLRRK IAYVPQDVVL FDTTVGYNVA 540
  541 YGDENVNEVD IVKACKIARI HDEIVRLPFA YDTILGERGT YLSGGQRQRL SIARAIVKNP 600
  601 DILIFDEATS NLDVVSEREV YEAMMSVSKG KTVILVTHNV HEVMNADKVI VLNQGRVIEE 660
  661 GKPEELLNKK GAFYEMFKEQ INEENIFRKL EINEPKFNFV NDNIKIEPSE RRSVVNVIYS 720
  721 GKKYNRLIPK MLFPITNPRF IGFYDENGSE IFLLDDYTKL DENSRKILET ALAYNNLIFF 780
  781 VKKINEINIK GDQLEWDLVT DRGEVTAYTV GRRNVILLDS KVVLIDKNDN LYEIDLNNLD 840
  841 KNSLKLLAET V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle