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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7515889
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIGVRIVSI AIAALMVALF TLPTVLPIAQ AAQDVIPAQT IEPGFDEPLV IDLDQMQDMV  60
   61 ALTIVGQGFQ DASGLTFEIW RIVGERTSFG VYDFTTPIAV YGGDNQARLR YVLGEWVEDP 120
  121 SDLTPPTLVI DMEDITAETG ETVTVGPYEL RIKDEAGNVG RIEFTVADLV SGAPTITALN 180
  181 PYATVEDARM EIDHGLLSGD PPTDTIFDID PMYEGYVLPI YRPGDEVEFS VGNIPGTTER 240
  241 IYVYLDWVGS GNSVRISPGE TGTLRLPKEL PMGIHLLIAV IYYEDAGERH ATLAFTPIYI 300
  301 IPKLFEAEPF VIEGDAGETI SLDIRGLPFS TQVGNDIDGD GSLEVGWLEN PFSGTGNTFD 360
  361 LIIDGPVSTT ERGSLSVTTV LEDDIEGQDR GSLDLYLYVR GGDSTIVWNH DVEPDLHVVT 420
  421 EIKFPAALVA SRPDVPPDSF TYGDSGLVVY VDGDPLTSAN SPLEIPGCSD SIVEVVVFNT 480
  481 MARATVSIYL GPFLLGTVTT DSRGAAKLTV NLAEIGPLPD ADATGDMDYA FTAVAVRGGF 540
  541 YDNINMDNED GIFIDIVPTY FVDVGETAFY FEDGGIWAGN GTQFIITICG VEPFETVTIT 600
  601 EEIDLESSAS TVVADSRGVA QYVHIAPDIE NTGKDVTVIA QDSDNDTSAY FSTVLEYKVP 660
  661 ELLTFNTSYE IDSTALGTIK YSTDKPGNSL NSGTTDTLEI DADNTGYVVP GLTYEVYIGD 720
  721 TVVEVDGQDI ISNEPYPLDT VAPGEPGVYP LTIKAQGFSF IEEGLYYLVV SDPLSLEPQI 780
  781 IQVYPMESEI LAGPPGGVLF AAFNYTDEDS IEIRSPTITT PGSTPASFDV IADTGVTVTL 840
  841 SGDEYVVGVD DNGAVMYTVE NFQTPATTHT LHMQGGLGGL FTFNIELVPH WKVTILNTDI 900
  901 DGDGVSEVAA SGENVQVQVI AHGAKSGGLY KVVLVKPGTE DPLVSLAGET FESAAFQASV 960
  961 DGTINATVTV APELINVALA SMFEAVVVDV QTGQVVARSL NLAEVVPAIG SNAMLSTYIL1020
 1021 TPLTPLKLYV SFTPFSSLTD PVDDDPSATF ADDTIVAVTV QVSVKTLAGA TLFTTVGTAI1080
 1081 SYYDFVNNTF ANPYDASTLS GAIFLVLIPN YDKSLAGQYV KIVIDKIVVQ TVENDSDLTN1140
 1141 PTPEFHLVPD TIDYTLGVVR LGADGGVLSI VDLSSVEEGI SEVKSIVLAI QDDLTVIDTK1200
 1201 LDSIEATVTE INEGVAILQT DLGNLQASVD ELTELLQQTG EEITMKLDEI SGDLAEISNG1260
 1261 VATIQGDVAT ILELLDAMNA TLTTIQGDVA EIKTTAGTIL VSVQDLQTIV ADSTDAVIKA1320
 1321 VEDNVALVLD GQQLILESLD TLDAKITAVS DGVAEVQTIL GDVSVSLEDL VEANATIEEV1380
 1381 VVENNQLLAT ITTSMGTLTA DMSTLKDLIE SGVNVKLDQV LEDLSTISDQ NAQLAAQAEA1440
 1441 IAQTLAAVQD DTAKITDIQS TLASVAGDVA SVKQDTSTIS SKLDDANGKL DSISSKVDSV1500
 1501 SSAVADIQEQ LGQVGDTAES ASGRAQTWGI INAVLSLAVL GVAGYLVLQL TRRE

YRC Informatics Platform - Version 3.0
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