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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33152299, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLLSSLL VANGVIAAPF VVKDIRIDGV QTETGNAIIA SLPVKVGQTA TDGDVTNIVK  60
   61 QLFSQNRFEN VSAAREGQTL VIKVAERPLI NNLTIKGNNA IPKNALEQNL KANLIVAGEV 120
  121 YDKAKLEAFK QALVDHYHTM GRYQADIQTI TTPNNNGSIN VELNITEGEI AYVKKINFEG 180
  181 NNAFSYDELI KELEIKPNAP WWNIFESSKF QQQEYNKDIE ILRDFYMDHG YAKFTLKDTD 240
  241 VKFNENKTEV DLTYKINEGS QYNISEMRII GDTQKLDNEL NQLLTHFKAG QLFRKTELSI 300
  301 IEEQIKQILG DRGYGSAKVD LYPKFNEEDH TVQINFIVDA GRRIYVRKIR FEGNDVTADS 360
  361 TLRREMRQQE GAWLSTSAVS LAKSRLERTG FYETVEMSMP TVKNTDDQVD IIYKIKERNT 420
  421 GSINFGVGYG SGSGLSYNAG ITQDNFLGMG SSLGLNGSRN TDSTNVNLSY TEPYFTKDGV 480
  481 SLGGNIFYED YDNSARKASA AYKRKTYGAS GTLGFPVDEN NSYYLGLGYT HDKLRNVERE 540
  541 YTREKYVNSM KFPINPQNSH YDRIQSADFD LSFGWNYNNL NRGYFPTAGS SANISGKLTL 600
  601 PGSDNKYYQV GTNFSGYIPL NSEHKWVIAT KGGLAYTNSF GGKEVPFYQL YSAGGMGSLR 660
  661 GFAGGSIGPK AIYYREDGFK APSQDVIGGN AMVNASLELI IPAPFISDKY QHNVRTSVFV 720
  721 DAATVWNTKW KQSKADYPNL PDFGDYKRVR ASAGIALQWQ SPIGPLSFSY AKPIKKYAGD 780
  781 EIEQFQFTVG STF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle