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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38679167, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAAGSASR VAVPLLLCAM LAPSGAYELD DSDGLGLEFD GIGAVSGGGA TSRLLVNYPE  60
   61 PYRSEILDYL FKPNFGASLH ILKVEIGGDG QTTDGTEPSH MHYELDENYF RGYEWWLMKE 120
  121 AKKRNPNIIL MGLPWSFPGW LGKGFSWPYV NLQLTAFYIV RWILGAKHYH DLDIDYIGIW 180
  181 NERPFDANYI KELRKMLDYE GLQRVRIIAS DNLWEPISSS VLLDQELWKV VDVIGAHYPG 240
  241 TYTVWNAKMS GKKLWSSEDF STVNSNVGAG CWGRILNQNY INGNMTATIA WNLVASYYEE 300
  301 LPYGRSGLMT AQEPWSGHYV VASPIWVSAH TTQFTQPGWY YLKTVGHLEK GGSYVALTDG 360
  361 LGNFTIIVET MSRQHSMCIR PYLPYYNVSR QLATFILKGS LKEIQELQVW YTKLGTTPEK 420
  421 LHFKQLETLW LLDGSGSFSL ELEEDEMFTL TTLTTGHKGS YRPPPKSQPF PTSYKDDFNV 480
  481 EYPLFSEAPN FADQTGVFEY YTNNEDLEHR FTLRQVLNQR PITWAADASS TISVIGDHHW 540
  541 SNMTVQCDVY IETPRTGGVF IAGRVNKGGI LIRTASGVFF WIFANGSYRV TADLGGWITY 600
  601 ASGHADVTAK RWYTLTLGIK GYLASGMLNG KILWENVPVK YPGHGWAAIG THTFEFAQFD 660
  661 NFHVEAAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle