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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51859367, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTFTIIVF GVLVAAVLLS PLAEGGQNPD YMLHGTGVKP GSDPRRAQAG DGSTVAPEDA  60
   61 ARFLSCYCSG HCPEDATNNT CETNGHCFAI IEEDEHGEAM LTSGCMKYEG SHFQCKDSPN 120
  121 AQTRRTIECC STDFCNRDLQ PTLPPPIPGK PPFWNAHLLA FLISVTVCCF TLVAITIVCY 180
  181 YRFKLQTGRR HYQRDLGPIE AFIPAGESLK DLISQSSTGS GSGLPLLVQR TIAKHIQMVR 240
  241 QIGKGRYGEV WLGRWRGENV AVKVFFTREE ASWFRETEIY QTVLMRHENI LGFIAADIKG 300
  301 TGTFTQLFLI TDYHENGSLC DYLKYTTLDT QALLRLAYSA ACGLCHLHTE IYGTQGKPAI 360
  361 AHRDLKSKNI LIKKNGTCCI ADLGLAVKYN SDTNEVDVPL STRMGTRRYM APEVLDETLN 420
  421 KNQFQAYIMA DIYSYGLIVW EMARRCVTGG IVEEYQLPYW DMVPSEPSYE DMREVVCVKS 480
  481 MRPVVSNRWN SDECLRVMLK LMSECWAHNP ASRLTALRVK KSLAKMVESQ DIKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle