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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LpR2-PE
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTCMPHFT EYFQTTTQSE LTTNESANSR SSSSSSGCRE PSKTSGFFYS ASTHYQSKVQ  60
   61 QLISFSFTSS FHLLFITCIL SISKFCNAAA VNAAHVTAAT PTASEIMHNL SGSALLERLK 120
  121 ASTLGPTLDQ LKHLAPAAAN SISPGTGSGM GIGMGHFGSS INSVLNGNPL KFLNVSGKIG 180
  181 TPLDISLGLS NYCDEKQFQC STGECIPIRF VCDGSSDCPD HSDERLEECK FTESTCSQEQ 240
  241 FRCGNGKCIP RRWVCDREND CADGSDESTS QCRSHTCSPE EFACKSGEGE CIPLSWMCDQ 300
  301 NKDCRDGSDE AQCNRTCRSD EFTCGNGRCI QNRFKCDDDD DCGDGSDEKN CGEKAKCGSN 360
  361 FFACKSGPCI PNQWVCDGDS DCRNGEDEMQ NCTVSLLNFC QAGEFQCSDR ITCLHKSWVC 420
  421 DGEADCPDGE DESQSNCLKV SCRPDQFQCN DQSCIAGHLT CNGKRDCADG SDEIMCDISA 480
  481 TPRTCNATTE FDCGGGLCIP NAKVCNRRKD CPNGEDEPAG KCGINECSSK NGGCMHQCVN 540
  541 LEVGYRCECH DGYKLGADQH TCVDIDECET PGICSQVCVN EIGAFKCECE AGYMRLLKNH 600
  601 TRCKASEGHA SLLLARRHDI RKIALDRPEM TSIVNSTKAA TALDFVFRTG MIFWSDVATQ 660
  661 SIYKAPIDEG NDRTVVLTKS SVTSDGLAVD WIYNHVYFTD THKCTIELTN FEGSMGKVLV 720
  721 KDSLDIPRSI ALDPIEGWMY WSDWGASPRI ERAGMDGTHR TAIITYDVKW PNGITLDLVQ 780
  781 KRLYWVDGKL NTISSSNYDG SQRHQVLYSG EYLRHPFSIT TFEDYVYWTD WDKQAVFKAN 840
  841 KFNGMDVEPV TATHMLEHPM VVHVYHPYRQ PDGVNHCQSV NGHCSHLCLP APRINERSPR 900
  901 ISCACPTGLK LMPDGLMCVE DLGIPTVRPT APMHRTIEQS SNSTTKLPQD GYSETPVETK 960
  961 TGNNRTDTSN QVHKSDAESE NDYVEIALHV IASLAGTALV ASVIYVVYRR CTRAVNSMNF1020
 1021 ENPVYHKTTE DHFSLEKNGT PHIYAAANDE EAVNPLFKSG TECV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle