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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: babo-PC
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALRLIFL GALLGASVCA SPIEFVMDTS LNGSRSDPAT ATHPGKWPPT TKAPALRAPA  60
   61 GTAGHAYQSP SSSLAADNRS HDNNNASAVS MLLPQDGDAS GAVAPAVTPQ LPIYIAQPSA 120
  121 KKPENKIKCH CDTCKESNNI CETDGFCFTS VEKNSDGSII FSYRCITDQL PPEDPTSCKL 180
  181 NSEAGSSQCC AEDFCNTREN YSGVLPDYVP HRLTSWEFVA IILGATLFIC FTGTSTWYYC 240
  241 QRRKRMASGR TFAKEDSAYD PILNGNTTIH DIIEMTTSGS GSAGLPLLVQ RSIARQVQLC 300
  301 HVIGKGRFGE VWRGRWRGEN VAVKIFSSRE ECSWFREAEI YQTVMLRHEN ILGFIAADNK 360
  361 DNGTWTQLWL VTDYHENGSL FDYLTTHPVD TNTMLNMSLS IATGLAHLHM DIVGTRGKPA 420
  421 IAHRDLKSKN ILVKSNLSCA IGDLGLAVRH VEKNDSVDIP STHRVGTKRY MAPEVLDESM 480
  481 NDQHFDSYKR ADVYAFGLIL WEIARRCNMG MIYDEYQLPY YDVVQPDPSI EEMKKVVCIE 540
  541 KCRPNIPNRW HASDVLHNMA KVMKECWYPN PVARLTALRI KKTLASISVE DKVKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle