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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33359653
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQYHSSYD PENSASHYTF LPDQPDSGHR KSLKIISGIF LSSFLLLSVA FFPILNNQSP  60
   61 DLQSNSRSPA PPSRGVSQGV SDKTFRDVVN ASHISYAWSN AMLSWQRTAY HFQPQKNWMN 120
  121 DPNGPLYHKG WYHLFYQYNP DSAIWGNITW GHAVSKDLIH WLYLPFAMVP DQWYDINGVW 180
  181 TGSATILPDG QIMMLYTGDT DDYVQVQNLA YPTNLSDPLL LDWVKYKGNP VLVPPPGIGV 240
  241 KDFRDPTTAW TGPQNGQWLL TIGSKIGKTG IALVYETSNF TSFKLLGEVL HAVPGTGMWE 300
  301 CVDFYPVSTE KTNGLDTSYN GPGVKHVLKA SLDDNKQDHY AIGTYDLTKN KWTPDNPELD 360
  361 CGIGLKLDYG KYYASKTFYD PKKQRRVLWG WIGETDSESA DLQKGWASVQ SIPRTVLYDK 420
  421 KTGTHLLQWP VEEIESLRAG DPIVKQVNLQ PGSIELLHVD SAAELDIEAS FEVDKVALQG 480
  481 IIEADHVGFS CSTSGGAASR GILGPFGVVV IADQTLSELT PVYFFISKGA DGRAETHFCA 540
  541 DQTRSSEAPG VAKQVYGSSV PVLDGEKHSM RLLVDHSIVE SFAQGGRTVI TSRIYPTKAV 600
  601 NGAARLFVFN NATGASVTAS VKIWSLESAN IRSFPLQDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle