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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BST1_ASHGO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSVLRFQRN MASWVKRHVF TFDLGDIQEK RGSDSGSGQS RSTADRYFNA VFGLGLLLFC  60
   61 IVCMAYLSPF LGSDLPQCRS RTMYPSYALV QGFDRRFSRL GRKYHLYLYR EAGKDNGFSD 120
  121 DNEIHLDGIP VLFIPGNAGT YKQVRSIAAA TANLYYGEMR DALNNNNTKN LDFFTADFNE 180
  181 DFTAFHGRTM LDQAEYCNDA IRYILSIYEL SDKYRASGEP LPTSVLVVGH SMGGIVARVM 240
  241 TTLKNHIPQS INTILTLSSP HSTAPATFDG DILKIYNAMN AFWESKFRDR DKDPFYAENV 300
  301 SVISITGGVL DSVLPADYTS LEGIIPSDNG FTTYTTTIPW VWTPIDHLAI VWCDQLRIVV 360
  361 AKLLLELVDR TSASKTRPLP DRMRLARRSL LSGLESSASA DFHLWDNEDY IFQPKVAPGA 420
  421 LTTAQEMSPI LLNVETYDTL NEYNYLAIPH NEPNLRFSLL TSLENLEELH ILFCQNYNEH 480
  481 NSNGPIEYSS RCVSPSQDFI HVPRSFENSK YPSESSVGSA SLPFKALHFN QTLLSKYDFI 540
  541 KFRKPSKSSF KDEDFVLVEL STTDWQTTVN CNPFQLLLSS AKFAHNASSA PFIQTFRFPY 600
  601 LSSSLVSYKL DVSYTGENLV FEPFIAQSID SPFETKWHLR LRDSVTITIH SEAPFIPFES 660
  661 HYDKSVKLRL IAPPDCNINL SLSINWYMTL KFLFIRYRLA VAALPLSLVS FVLANQFALY 720
  721 YSSSFFPDFS TTLRAVTSKF WLKLTLSSIL LTPILNISFI QRLIHSLDPS GVNSPFLIRK 780
  781 KNIMTAAYYL GIREIFMCWI GPLLSCITLS LVYMLAFGIS TLESCVRRVS CYMSTAISKT 840
  841 RMKEIWLKDE CEYEEGLVLR RRIGSGIMIL AVVLYVPYQL VFVLLFLVQL NTVIKLNINY 900
  901 FNTKRHSNLR NYNSSYLLLM LCVLPINAPM VFVFLHNFGR RWVTSFRSHH NCLAILPIIL 960
  961 LVCDNAGLRI PRSHCIERIS KLITIGSFLY LSLYSVIYGI RNLFWAHHLV NLISGWLLFT1020
 1021 SLDLTSNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle