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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44986070
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGAASGER VQVQRIYVES VGSDGTQTVP AIQVDDQPAE SPFSDEFQFE VGGREGRQPS  60
   61 ILKAERQPQR QGGKLAFATG TGEHVDGANS EFSMTLTPTR VGQPQSVPLS DGKRRELRSA 120
  121 KEMKILRWGT QRHRTGRPVG RARTLRWGKK NYDNLPEDRG SGGSDTDAGV AGKSRAAEKR 180
  181 AVYFNMPLPP ELTGENGRPV VNYPRNKIRT TKYTPLSFLP KNLAYQFKNA ANIYFLLLVC 240
  241 LSFVSIFGVT NPALAAIPLI AIVVITGLKD AFEDSRRTIL DLEVNNMRSH ILHGVENNNV 300
  301 SADNVSLWRK FKKLNTRLLI ATVRFFRESF TEAGRRRRAQ RAREESQMAA SRLGSDPRMS 360
  361 LDSMGSYRPS LDFDNIGQLV SSDQVSVLNR NLPPVPDCRF GKSHWKDIRV GDIVRIHNND 420
  421 EIPADIILLS TSDADGACYV ETKNLDGETN LKVRQSLKCS HRIRNSKDIS RCKFWVESEG 480
  481 PHANLYSYQG NFKWVDSETG VMHNEPVNIN NMLLRGCSLR NTKWAMGIVM FTGTDTKIML 540
  541 NAGVTPTKRS RISRELNYSV ILNFVFLFVL CLAAGLVNGI YYRRDATSRT FFEFGTVAGT 600
  601 PFANGILAFF VALILYQSLV PISLYISIEI IKTAQAAFIY GDVLLYNPKL DYPCTPRTWN 660
  661 ISDDLGQIEY IFSDKTGTLT QNVMEFKKCT INGVSYGRAY TEALAGLRKR QGVDIEEEGA 720
  721 RERAEIEEDK KQMVELLLKL GKNSQLDPHT VTFVSKELVQ DLGGANSQEQ KEAVEHFMLS 780
  781 LALCHSVVVE ENKNNPEKLD IKAQSPDEAA LVETARDMGF SFVGRTKNGV IIEIQGVQKE 840
  841 FRILNVLEFN STRKRMSCIV KIPAADENSK PKALLLCKGA DSVIYSRLDR SRNDPKLLER 900
  901 TALHLEQFAT EGLRTLCVAQ REIDWDEYLN WNERRELAAA SLDNREEALE RVADAIERQL 960
  961 VLLGGTAIED RLQDGVPDSI SILADAGIKL WVLTGDKVET AINIGFSCNL LGSDMELLVI1020
 1021 KSSGEDVEHL GEKDSDVVLA LIDKYLETHF NMKGSPEELA AARKDHTPPQ SAFGVVIDGD1080
 1081 ALKLALHGED IRRKFLLLCK NCKAVLCCRV SPSQKAAVVK LVKESLDVVT LAIGDGSNDV1140
 1141 AMIQAADVGI GIAGEEGRQA VMSADYAIGQ FRYLTRLVLV HGRWSYKRLA EMIPQFFYKN1200
 1201 ITFTLALFWF GICSNYDGSY LFEYTYLMFY NLAFTSLPVI FLGIMDQDAS DVLSVVVPQL1260
 1261 YKVGILRTEW TQNKFWWYCF DGVYQSIICF FFPYLCYYRT GLITKNAYGL DHRYTFGVFV1320
 1321 TSIAVVSCNL YVLIHQYRWD WFTTLFIFLS CGILFFWTGV WSSATYSGEF YKTAVRLYAQ1380
 1381 PVFWAVLFVG VIFCLLPRFT WDAVQKLFFP RDIDIVRECW WRGDFDMYPE DYDPTDPNRP1440
 1441 RINVSHTGVD RASDDERSRT GSDLGVTRTT VISEDIPMGL IDKTAPHSRA DPTTPLGSED1500
 1501 SARYSLEVTR REMLQTHQLD SRYSVERART SLDLPGVTRA RTLISNH

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