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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44985847
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRTVDVKG SMASMSGSSM LATMVPTVGQ RPFKPCANCN CTPGQLWRQG RRTSQFLRRI  60
   61 SNSRKASSPA GSRGGSNESI YSSDSLWQTK LVTTTERLLA LRKQMAAEEL CCYVIPSEDE 120
  121 HNSEYVGPAD LRRQFITGFS GSAGVACVSR DMLNFNTDSP EGKAVLNTDG RYFNQARQEL 180
  181 DHNWTLLRQG EDSMTWVDWC LNEAYDMSIS LGGKPARIGI DPKLIVDSRV LSIKKQIADK 240
  241 TKGTNAVIEL VPVEKNLVDA IWAEFEEPPK RELYPLVLLP SVISGESYQT KRQRLMKQLK 300
  301 ENYAGHTAFC VTALDEICWF LNIRGSDVEY NPVFYAYFVI HQDSSVLYTD NPLSEEIEKY 360
  361 LADNDVAVKS YAEVWSDLKE LDVKLESAKE AILLPSTASW AITSNVSNAT YKLVSSPLAA 420
  421 FKAVKNEVEI NNARASQVKE AVCLVQFFAW LEEELVQKEK LIDEYKAATK LHEIRKTQKN 480
  481 FVGNSFETIS ASGSNAAVIH YSPPSEGSAM ICPYKIYLCD SGSQFLEGTT DITRTLHFST 540
  541 PTQEEVDSYT LVLKGNLALE RLVFPEGTTG NSIDVIARQF LWEQGLDYRH GTGHGIGSFL 600
  601 NVHEGPIGIG PSVAYAKYPL AKGNIISNEP GFYKDGEFGV RIENDMLVLE AEDLKFGTRK 660
  661 FLKFENITLV PYCRKLINPK LLTPEEIQQL NNYNSRIWSA VASHLQPQSI SYKWLKRETA 720
  721 VYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle