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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44984811, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTLIIAAK SPAVAYAELI AARAVNEAKQ DAVAIQFTEG KEAAAASFDG ESQNALERMV  60
   61 EKYPDVLGSV PEEAAWWIAY ARTDLVVKDF KKLSGSLEKL DAHLNLRTFV LGGMQPTVAD 120
  121 VAVWGALRSN GPVGSIIKNK VYVNVSRWYT TLELIPAFGG AHEFLAKSLK ELKAAGNVNK 180
  181 KKETHKANFE IDLPDAKIGE VVTRFPPEPS GYLHIGHAKA ALLNQYFAQA YKGKLIIRFD 240
  241 DTNPSKERVE FQDSILEDLE LLGIKGDRIT HSSDYFQEMY DYCVQMIKEG KAYCDDTPTE 300
  301 RMREERMEGI ASARRERSVE ENLKIFTEEM KNGTEEGLKN CVRAKRDYAA LNKTLKDPVL 360
  361 YRCNLTPHHR TGTAWKIYPT YDFCVPIVDA LEGVTHALRT IEYRDRNAQY EWMLNALKLR 420
  421 KVHIWDFARV NFVRTLLSKR KLQWLVDKQV VSNWDDPRFP TVRGVRRRGM TIEGLRNFVL 480
  481 SQGPSRNVIN LEWNLIWAFN KKVIDPIAPR HTVVTNPVKL HLNGADVPQT PLTEMKPKHK 540
  541 KNPAVGEKKV IYYKDVLIGA EDAAMLAAGE EVTLMDWGNA IIRGKNDDGS LTADLNLEGD 600
  601 FKKTKFKLTW LADTSDTVPV DLVDFDHLIS KDRLEEEDNF EDFLTPETEF HTTAIADLNV 660
  661 KDMKVGDVIQ FERTGYYRLD TVGSGDKPFV FFTIPDGKAV NKYGAKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle