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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45198730, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSVLERLD YLNQSSHFLV SDSTPLASLV NTPYRIYKAF YDAVVTQYLA SLNNPETLPF  60
   61 NSETFMSSVG YFFSSYAVGC FFIAVILSRL SAMAGLRSNT VRTSIPNWSR VTLHAVAIAA 120
  121 LVYGLCGVAI QYQVGWLRRW PTLEVGAFLS RTYVVFTLSH CIETFLSITT NGKPLEESDY 180
  181 TIFELSAQFY GMTKGGATAH EYGPDCIMAL SGRLIIHLVE LFRKRRWRLA CSTLLNTGFI 240
  241 SYLLLEVRSN GLGSLSLFTK CKHFPKFFSV FIIGISMACY LLACLVRLNP TRDEGTSAVE 300
  301 DLQFHSFVSN WFKNLNLTGE EEFSITVMRL AVLLCNPSQN KEHGLHRELP HLKAAASLHK 360
  361 SYMISGYMNK LSKIPEAVTG SRADPAPKPR SVAIRRVLWL GSMLKGIFSR IRGSLAPPKA 420
  421 ATPVRNTHQK SANFNDYINE NNYTHFMTME NDETFSPLLP EEDGSADYES DSPDENDDVC 480
  481 DSDLDLEEPQ DILQEVVSPQ AMLELAHSSP QDLTWYLSMW TILNCESAPG KRLTRSQYAH 540
  541 INENGILKEV LLQRYMETCT SPSKLQDEDA DMSCVVCKTN LRNIVLWPCR CFALCEECRV 600
  601 SLGLRGFKAC VCCRADVHGY SRLNAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle