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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44984229
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMVARKKSK RRSKAGRDEK TKGSSSNTEK VVLCEQPTEE KEVEITVQEV MVDQGKRRWR  60
   61 ESRRLMFTLG AVLGLLLALY FGTDVHKQTY EGLDRIVNFE TFQDYFVDWK EVVPTNILSL 120
  121 VTDFQLRNTR SASLQDLTTS FAIGRQLQRD HELCDKHPVV MVPGVTSTGI ESWGLYKDAE 180
  181 CDSEPHFRRR LWGSFYMLKT MVLDKACWLR HVMLDPETGL DPPNYKLRAV QGFEAADFFM 240
  241 AGFWIWNKIL QNLGAIGYEP NKMVTAAYDW RLAFLDLERR DRYFSKLKMQ VEMMYDATGE 300
  301 KSVLVGHSMG SQIIFYFLKW VEAEGELYGN GGPGWVEKHI DSFVNVAGTL LGVPKAMPAL 360
  361 LSGEMKDTID LNALAMYGLE KFFSRKERLD LLRSWGGIPS MIPKGGNLIW GNMTYSVEDV 420
  421 LHNNTDTYGN FIRFNKPQGP LSSRNLTMED AIDYIFELAP GWLGRRATDQ YSFGYATSPE 480
  481 QMQLNERHHA HWSNPLEVPL PRAPSMKLYC LYGVGNPTER AYVYKEERKI SSLNVTIDYE 540
  541 SDTPVFFSDG DGTVPVLTHA MCHKWAEGVS PYNPAGINVT IVEMQHQPDR FDIRGGAKSA 600
  601 EHVDVLGRAE LNEYILRIAA GHGASIQPRF LTDMADWVAR LNFPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle