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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44983460
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGASQIQCM DSNYTCVFGS YNTTTVNLVL GLPGMFSTFT SSQLLKLRIL AITASAVSII  60
   61 AGIIGLEMVA CIDRRRKVFR HHMVMFLIVF DLLKAIVLLV YPVTILINNG VYATPAFFNV 120
  121 VGWLTAYAIE GADIAIVIFA IHFGLLIFRP NWKWPNPTTG NMEGGFYKCR RFMYPIAGLL 180
  181 PMLLASLAFI GYDKKHDPSV SGVVILDNNT YHFPSDPRVG GYKPMSAWCY LPPYPYWYKL 240
  241 VLSWGPRYVI FVSICGIYVS IYVYVSSKSQ RIKSELGDFH QRTSSRRRVT LSSQETRDPP 300
  301 KTLQQRVVRS ATYFADSLGL VWLFRTVKNF FLLTAEDEQF ESDPEDSCAD EEVEDFYHGV 360
  361 KSLNYDEEHL APTTASDGAS LGDGILPGPL GSSTGRHFLL PPTIANAYGS NTEGASRVSS 420
  421 AYAGDNAALL GVARDQQSLN SENDVKHKPS LGRRESFFSN RSSCSRKFPK TAIQPLSPIL 480
  481 SPSAMHVSRP LPVEMFEHNM DMKSAMASLH EPLHQYDYYY PGALTDLKKD IHSDTYKEFK 540
  541 RRRYQIRKQL KSLFIYPFAY LVVWLFPFIV DCTHYRYELR NGPIIWLAYI ATFMQPLNCL 600
  601 VDVFVASYRE RPWRYTWSSI EKKEILNKYL LKGELGEQTI MELVNSDLGR RGWYYRGRWM 660
  661 KRECWRHKPS RWKRACWYVY RTVKGFIKND YDFTDNCNDH EYWEKYYTLG LSSESSYDTR 720
  721 KNTDNDTNPI GMSGTCPREA NTAPVSKQEN EIIRIPIYWR IIHCHPMMRG IDLDELDRKI 780
  781 RLKSKEYNFV TPGLHAALTG SARHCFDPTG DSYHQISDPS FPPNYSIGDG NKGTPASFAA 840
  841 PSDSGDLPVS LRVTAQDRAG DNVAFSDETN DVHFAQGTKG IDGQSVADSG SQMIDLLSFL 900
  901 KGHEDRPSRD TITHQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle