YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62649224, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVGGRCWLI LLALGLIAPQ SPLGPALRPA VDFPGADMAS GSACTAVKIG IIGGTGLDDP  60
   61 EILEGRTEKY VDTPFGKPSD ALILGKIKNV DCVLLASMYV LDRMCEFLLL PFCVQLNSLH 120
  121 EIPPGSSCHT SYLFAFVARW ERRVRWLARV LCERAFVPSS ASTSVQWKET KHSKEITQRS 180
  181 KASRFSTTVQ QQAIREECQT SLRPQTFYDG SHCSARGVCH IPMAEPFCPK TREVLIEMAK 240
  241 KLGLRCHSKG TIVTIEGPRF SSRAESFIFR TWGADVINMT TVPEVVLAKE AGLCYASIAM 300
  301 ATDYDCWKEH EEAVSVDGVL KTMKENANKA KSLLLTTIPQ IGSMEWSETL RNLKVVAVKL 360
  361 YGEKKRELHQ KSSGGMLQML ASSKDSGQLA E

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	391	0.99