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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086592, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSAEQRHQA LEVKYGQERE RKPKCCPEER QEEHEMHSFN AIRVQILPGS NMYQTPTPLG  60
   61 FLQVSSTRLQ YLATQPHGQS NYEGSHPLQS RFPSFKGNFM GLKWGATELV GAGSGIGDAL 120
  121 GPGGPGPFLS KGLTGVGDSE GWGPGICIYT PARDRNEDHR ARPSAAPSPQ PAAGYITGRE 180
  181 PPHSRETSTA PPPLLAPRQK EPGGAANMAE RRRHKKRIQE VGEPSKEEKA VAKYLRFNCP 240
  241 TKSTNMMGHR VDYFIASKAV ECLLDSKWAK AKKGEEALFT TRESVVDYCN RLLKKQFFHR 300
  301 ALKVMKMKYD KDIKKEKEKG KSESGKEDDK KSKKESIKEE KTKKEKEKKK DGEKEDSKKE 360
  361 ETPGTPKKKE TKKKFKLEPH DDQVFLDGNE VFVWIYDPVH IKTFVMGLIL VIAVIAATLF 420
  421 PLWPAEMRVG VYYLSVGAGC FVASILLLAI ARCILFLIIW LITGGRHHFW FLPNLTADVG 480
  481 FIDSFRPLYT HEYKGPKADL KKDEKSEAKK QHKSDSEEKS DSEKKEDEEG KGAPGDHGPE 540
  541 GSGGERHSDT DSDRREDDRS QHSSGNGNDF EMITKEELEQ QTDGDCDEED DDKDGEMPKS 600
  601 AQEKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle