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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086478
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQNDLMGTA EDFADQFLRV TKQYLPHVAR LCLISTFLED GIRMWFQWSE QRDYIDTTWS  60
   61 CGYLLASSFV FLNLLGQLTG CVLVLSRNFV QYACFGLFGI IALQTIAYSI LWDLKFLMRN 120
  121 LALGGGLLLL LAESRSEGKS MFAGVPTMRE SSPKQYMQLG GRVLLVLMFM TLLHFDASFF 180
  181 SSSVYTVGQY SFVYHMEKQG WQKGLLGRCT QHDDGSLNVF FESVQIIQNI VGTALMILVA 240
  241 IGFKTKLAAL TLVVWLFAIN VYFNAFWTIP VYKPMHDFLK YDFFQTMSVI GGLLLVVALG 300
  301 PGGVSMDEKK KEWINEDIRE TPSQENSTVL EGWVLLLAQV LDVSWLDAFY WVKGPVPSWP 360
  361 YFSPSRFSFD LVGVGQQSQA GVLTQKCKHI RRWFVHDRRR HLTPQPPREA ERGPGRKQVS 420
  421 PPRKCSKMAA VMALTVLRSR ITRWPQWACA GPAPFCAVRR SVFGFSVRSG MVCRPHRCCS 480
  481 STAETAAAKA EDDSFLQWFL LFIPATAFGL GTWQVQRRKW KLKLIAELES RVMAEPIPLP 540
  541 ADPMELKNLE YRPVKVRGHF DHSKELYIMP RTMVDPVREA RDAGRLSSTE SGAYVVTPFH 600
  601 CSDLGVTILV NRGFVPRKKV NPETRQQGQV LGEVDLVGIV RLTENRKPFV PENNPERSLW 660
  661 YYRDLDAMAK RTGTDPIFID ADFNSTTPGG PIGGQTRVTL RNEHMQYIIT WYGLCAATSY 720
  721 LWFRKFVRRT PGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle