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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19715905
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSENHHPH HQHHHSDTEI IGNDRASYSG PLSGPLNKRG GKKSARFNIP ESTDIGTSVG  60
   61 TGGKSNDDAY VEITLDVRED SVAVHSVKTA GGDDVEDPEL ALLAKGLEKK STLGSSLVRN 120
  121 ASSRIRQVSQ ELRRLASLNK RPIPTGRFDR NKSAAAHALK GLKFISKTDG GAGWAAVEKR 180
  181 FDEITASTTG LLPRAKFGEC IGMNKESKEF AVELYDALAR RRNITTDSIN KAQLKEFWDQ 240
  241 VADQSFDSRL QTFFDMVDKD ADGRITEEEV REIIGLSASA NRLSTIQKQA DEYAAMIMEE 300
  301 LDPNNLGYIM IENLEMLLLQ APNQSVQRGG ESRNLSQMLS QKLKHTQERN PIVRWYKSFM 360
  361 YFLLDNWQRV WVLLLWIGIM AGLFTWKYIQ YKEKAAYKVM GPCVCFAKGA AETLKLNMAI 420
  421 ILFPVCRNTI TWLRNKTRLG AAVPFDDNLN FHKVIAVAIA LGVGIHGLSH LTCDFPRLLN 480
  481 ASEEEYEPMK YYFGDQPESY WWFIKGVEGV TGIIMVVLMA IAFTLATPWF RRNRVSLPKP 540
  541 FHKLTGXNAF WYSHHLFVIV YTLFIVHGEK LYITKDWYKR TDMDVLLTIP IILYASERLI 600
  601 RAFRSSIKAV KILKVAVYPG NVLALHMSKP QGYKYKSGQY MFVNCAAVSP FEWHPFSITS 660
  661 APGDDYLSVH IRTLGDWTRQ LKTVFSEVCQ PPPNGKSGLL RADYLQGENN PNFPRVLIDG 720
  721 PYGAPAQDYK KYEVVLLVGL GIGATPMISI VKDIVNNMKA MDEEENSLED GHNNNMAPNS 780
  781 SPNIAKNKGN KSGSASGGNN FNTRRAYFYW VTREQGSFDW FKGIMNEAAE MDHKGVIEMH 840
  841 NYCTSVYEEG DARSALITML QSLHHAKNGV DIVSGTRVKS HFAKPNWRNV YKRIALNHPE 900
  901 AKVGVFYCGA PALTKELRQH ALDFSHKTST KFDFHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle