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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15602303, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.21
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKNLVLWIV VAVVMMTAYQ GFNSSSSGNT TDYTTFITDL GNDQIRQARF DYNEIFVTKT  60
   61 DGSKYTTVMP LNDDKLLNDL LNKKVKVEGT LPEKRGLFSQ ILISWFPMLL LIGVWFFFMR 120
  121 QMQGGGSKAM SFGKSRARMM TQEQIKTTFA DVAGCDEAKE EVGEIVDFLR DPGKFQKLGG 180
  181 KIPKGILMVG PPGTGKTLLA KAIAGEAKVP FFTISGSDFV EMFVGVGASR VRDMFEQAKK 240
  241 NAPCLIFIDE IDAVGRQRGA GLGGGHDERE QTLNQMLVEM DGFEGNEGVI VIAATNRPDV 300
  301 LDPALTRPGR FDRQVVVGLP DVRGREQILK VHMRRVPIAP DVDAMTLARG TPGYSGADLA 360
  361 NLVNEAALFA ARTNKRLVTM LEFEKAKDKI NMGPERRTMI MTEKQKESTA YHEAGHAIVG 420
  421 YLVPEHDPVH KVTIIPRGRA LGVTFFLPEG DQVSISQKQL ESKLSTLYAG RLAEDLIYGE 480
  481 ENISTGASND IKVATNIARN MVTQWGFSEK LGPILYSEDD GEVFLGRSMA KAKHMSDETA 540
  541 HLIDEEVRTI VTRNYERARQ ILIDNMDILH AMKDALVKYE TIEEEQIEQL MKRQPVTPPS 600
  601 GWDENEPTTQ NNAGTKASPE PKSAVETEQD SDHQSPSDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle