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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115462165, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHELLLALL GFTGDFVLDA ASSPSATRRR RPVPPEAAAG GDVGPASFRL APDLTFLQPS  60
   61 ERSAIERLIS LGFYYRELNR FATESRDLSW INSPIDVSPT HGEKTVKAKV RKGSAYRRAI 120
  121 ANGIAEILSV YRSAVLQVEQ NLLSDPLPIL ATVTHGLNKF EVLLPPLHEL VMEIEQKDIK 180
  181 GGQLLNLLHK RCHCGVPELQ SCIQRLLWHG HQVMFNQLTS WMVYGILQDQ YNEFFIRRQE 240
  241 DRDKENDSSQ VDVADKFTQK SAKETSLTSW HTGFHVSLDM LPEYIHMRVA ESILFAGKAI 300
  301 RVLRNPSPGA TLQESMNQSQ NVKGSYRMQS LIGGSGALKE LPNFPNISAE ELLPQAEADK 360
  361 IDAMLKELKH SSEFHKRLFE SAVGSIRTMA ANNLWQLVVV RADLNGHLKA LKDYFLLAKG 420
  421 DFFQCFLEES RQLMRLPPRQ STAEADLMVP FQLAALKTIG DEDKYFARVS LRMSSFGIKA 480
  481 STSQKDLQKS STPEISSQGK ATSELALDGW DSIALEYSVD WPLQLFFTPD VVSKYRKVFQ 540
  541 YLIRLKRTQM ELEKSWAAVM HQDHADFSDY CKDRKNGDAT QLRRQRSKPF WRVREHMAFL 600
  601 IRNLQFYIQV DVIESQWNVL QAHVQDSHDF TELVTFHQEY LSALISQSFL DIGSVSRILD 660
  661 SIMKLCLQFC WSIEQYENRR NMLEIDHITE EFNKKSNSLY TILRSSRLAG SQRAPFLRQF 720
  721 LMRLNYNSFF ETTARGVMNS AGGRLRPSTA GTQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle