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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18252319
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFNMHS RTVAIVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LQLSYTLHQQ NPVGYTVPIH LPVVNQVFSS NCAVKISPNS PVARLRQLAG 240
  241 KHIPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNIAL DLASREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETDLTPEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDIATFNLH 420
  421 SIFREVHNMI KPVASIKRLS VALNIAADLP VYAIGDEKRL MQIILNVVGN AVKFSKEGSI 480
  481 SITAYVAKSE SLRDFRAPDF FPVQSDNHFY LRVQVKDSGS GINPQDIPNL FTKFTQTQTL 540
  541 ASQNSGGSGL GLAICKRFVN LMEGHIWIES EGLGKGCTAT FIVKLGFPER SNESKQPFAP 600
  601 KLQANHVQTN FPGLKVLVMD DNGVSRSVTK GLLVHLGCDV TTVSSIDEFL HVISQEHKVV 660
  661 FMDVCMPGID GYELAVRIHE RFTKRHERPV LVALTGSIDK MTKENCMRVG MDGVILKPVS 720
  721 VDKMRSVLSE LLEHRVLFEA M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle