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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25293875
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSTDIKSI LILGAGPIVI GQACEFDYSG TQACKALKEE GYRIILLNSN PATIMTDPDM  60
   61 ADATYVEPIH WEIVEKIIQK EKPDALLPTM GGQTALNCAL ELDHKGILKK YGVQIIGATV 120
  121 DAIKKAENRK LFEHSMKKLN LETAKCGIAH NIQEAFLVLN NVGFPCIIRP SFTMGGHGGG 180
  181 IAYNHEEFEK ICERGLELSP STELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENLDPM 240
  241 GIHTGDSITV APAQTLTDKE YQVMRNASMS ILREIGVETG GSNVQFAINP KNGRMIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAIGY TLDELANDIT GTNTTASFEP SIDYIVTKIP 360
  361 RFNFEKFPGC DDRLTTQMKS VGEVMAIGRT FQESIQKAIR GLEVGASGFD SKISSRDSEY 420
  421 LIKIRRELKD AGSERIWYIG DAFRYGMSIN DVFDLTSIDP WFLVQIKEII LLEKKIIKNG 480
  481 FIGLKYDFFY FLKRKGFSDQ RIAILTNKNE SEIRQLRYKL NLHPVYKRID TCSAEFSTET 540
  541 AYMYSTWEDE CESHPSKNNK KIIILGGGPN RIGQGIEFDY CCVHAAQALR EDGFEAIMVN 600
  601 CNPETVSTDY DISDRLYFEP ITLENVLEIV RIEKPKGVII QYGGQTPLKL AHEFEKEGVP 660
  661 IIGTSPDSID TAENRYRFQK TVNKLRLQQP LNATVLTLDE AYKKADIIGY PIMVRPSYVL 720
  721 GGRAMEIVYE PYGLENYFKT TLKKNNTTPI LLDQYLDYAT EVDVDAICDG ETVLIGGIME 780
  781 HIEQAGVHSG DSACSLPAYT LTSKVQNEIR RQVKKLAFEL SVKGLMNIQF AIKNNKIYII 840
  841 EVNPRAARTV PFVSKAIGLA LAKISVRVMC GKTLLEQGFI KEIIPPYFSV KEAVLPFDKF 900
  901 QGVDPILGPE MRSTGEVMGI GKNFSEAFSK SMLGAHTNMK KSGRVLLSVR NNDKNNIINL 960
  961 AVKLKKLGFK IDATKGTSVA LKKSGISSRL VNKVHEGRPH IQDRLKNGEY SYIVNTTSCY1020
 1021 QGIKDSKLIC RSALQYKVHY DTTVNGAFAT VMALNENPIK NIETLQKIHK KIQLFYTKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle