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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|254818129
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFGSHLLA AAVAGTPPGE RPLRHVAELP PQAGRPRGWP EWAEPDVVDA FADRGISSPW  60
   61 SHQAEAAELA YAGRHVVIGT GPASGKSLAY QLLVLNALAT DSRARALYLS PTKALGHDQL 120
  121 RAAHALAAAV PRLADVAPTA YDGDSPDEVR RFARERSRWL FSNPEMTHLS VLRNHARWAV 180
  181 LLRNLRFVIV DECHYYRGVF GSNVAMVLRR LLRLCARYSA HPTVIFASAT TASPGATAAD 240
  241 LIGQPVVEVT EDGSPRGART VALWEPALRS DVIGEHGAPV RRSAGAEAAR VMADLIVEGA 300
  301 QTLTFVRSRR AAELTALGAR ARLVDIAPEL SDTVASYRAG YLAEDRSALH QALAEGQLRG 360
  361 LATTNALELG VDIAGLDAVV LAGFPGTVAS FWQQAGRSGR RGQGALVVLI ARDDPLDTYL 420
  421 VHHPAALLDK PVERVVIDPV NPHLLGPQLL CAATELPLDD AEVRSWGAVE VAESLVDDGL 480
  481 LRRRNGRYFP APGVKPHAAV DVRGAIGGQI VIVEAGTGRL LGSVGVGQAP AAAHPGAVYL 540
  541 HQGETYVVDS LDFQDGIAFV HAEDPGYATF AREVTDIAVT GTGERLVFGP VALGLVPVTV 600
  601 TNHVVGYLRR QLSGEVLDFV ELDMPEHTLP TTAVMYTITS DALVRSGIEA TRIPGSLHAA 660
  661 EHAAIGLLPL VASCDRGDIG GMSTATGPEG LPSVFVYDGY PGGAGFAERG FRRARTWLGA 720
  721 TAEAIEACEC PSGCPSCVQS PKCGNGNDPL DKAGAVRVLR LVLAELSEES P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle