YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPE24_MYCTU
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFSVLPPEI NSALIFAGAG PEPMAAAATA WDGLAMELAS AAASFGSVTS GLVGGAWQGA  60
   61 SSSAMAAAAA PYAAWLAAAA VQAEQTAAQA AAMIAEFEAV KTAVVQPMLV AANRADLVSL 120
  121 VMSNLFGQNA PAIAAIEATY EQMWAADVSA MSAYHAGASA IASALSPFSK PLQNLAGLPA 180
  181 WLASGAPAAA MTAAAGIPAL AGGPTAINLG IANVGGGNVG NANNGLANIG NANLGNYNFG 240
  241 SGNFGNSNIG SASLGNNNIG FGNLGSNNVG VGNLGNLNTG FANTGLGNFG FGNTGNNNIG 300
  301 IGLTGNNQIG IGGLNSGTGN FGLFNSGSGN VGFFNSGNGN FGIGNSGNFN TGGWNSGHGN 360
  361 TGFFNAGSFN TGMLDVGNAN TGSLNTGSYN MGDFNPGSSN TGTFNTGNAN TGFLNAGNIN 420
  421 TGVFNIGHMN NGLFNTGDMN NGVFYRGVGQ GSLQFSITTP DLTLPPLQIP GISVPAFSLP 480
  481 AITLPSLNIP AATTPANITV GAFSLPGLTL PSLNIPAATT PANITVGAFS LPGLTLPSLN 540
  541 IPAATTPANI TVGAFSLPGL TLPSLNIPAA TTPANITVGA FSLPGLTLPS LNIPAATTPA 600
  601 NITVGAFSLP GLTLPSLNIP AATTPANITV SGFQLPPLSI PSVAIPPVTV PPITVGAFNL 660
  661 PPLQIPEVTI PQLTIPAGIT IGGFSLPAIH TQPITVGQIG VGQFGLPSIG WDVFLSTPRI 720
  721 TVPAFGIPFT LQFQTNVPAL QPPGGGLSTF TNGALIFGEF DLPQLVVHPY TLTGPIVIGS 780
  781 FFLPAFNIPG IDVPAINVDG FTLPQITTPA ITTPEFAIPP IGVGGFTLPQ ITTQEIITPE 840
  841 LTINSIGVGG FTLPQITTPP ITTPPLTIDP INLTGFTLPQ ITTPPITTPP LTIDPINLTG 900
  901 FTLPQITTPP ITTPPLTIEP IGVGGFTTPP LTVPGIHLPS TTIGAFAIPG GPGYFNSSTA 960
  961 PSSGFFNSGA GGNSGFGNNG SGLSGWFNTN PAGLLGGSGY QNFGGLSSGF SNLGSGVSGF1020
 1021 ANRGILPFSV ASVVSGFANI GTNLAGFFQG TTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle