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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85091127
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLLVHGPP GIRVSPGGPD GTDCGTQKAS PQTLTSALKK RNSKVEKRVT FQPFSKLMRS  60
   61 AGNYVLSWRD GLTESERENK RRIEERMRFL EDVMHNATSA DEWETAAKEL DHLEGNDAWK 120
  121 LDPSTGDYHP DIIEAKLRDL DHARENGDTR EMMYLVRTAL SRDLGGMGNI DLYRHSYVGT 180
  181 KKLIEDYVDS AVKTIGALMD QSTQTLPADM ETKDLLEGML FARQSFGRSA LLLSGGATFG 240
  241 MSHIGVIKSL FEANLLPRII SGASAGSIVC SVLCTRKDEE VPDLIRTFPY GDLDVFKGPN 300
  301 DGISDSLRRL LTQGSWADIT NLTRVMRSML GDLTFQEAYN RTRRICNICV STASIYELPR 360
  361 LLNYITAPNV MIWSAVAASC SVPLVFQAAP LLVKDPATGA HVPWNPTPQR WIDGSVDNDL 420
  421 PMTRLAEMFN VNHFIVSQVN PHIVPFLSKD DRLYPRNHPG RLRQQKAAAQ ENNSEWLYYL 480
  481 TTLAKDEAVH RLHFLTEFGI FPGLLTKLRS ILSQRYSGDI TILPELELQD LPRILKNPTS 540
  541 EFMMRNCLIG ERATWPKLSR IRDRLAIELA LDQAVHALRA RVVFGKSQVD LSRSSGATFD 600
  601 PAIQPTPCFM RPPTSSGEAT PGEHQHHRSR HHHRRSSASS VQILASRHRK MYQSHDDDYL 660
  661 TDDQSEEDER LEMSYRRGAH TRPGSITPHA RAPVTHTLTK PRLQRSAKSA SHMREGRPWS 720
  721 QGHAHPQHAH GHSHSLHQAS HALQQLVQHG SGGDEAPFDF SRPLSPPTSH AGNCSTVGID 780
  781 EMAGEQNVAH SDADDEIQSD SA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle