YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13472042, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHGFLRLAA GAGRSLAVPA ILLALGAPAQ AGSLLEDCAN DKLTPPNRIV ACTNVLEDKA  60
   61 ASASDQAVAY FNRANALDRN GEFDRAIADY DKAIAFNPKD AEAFNNRGLI WGHKKDFDRA 120
  121 LADYDKAIEL NPQIAIAYAN RGLIWNDIKH DYVKAIADFD KAIRLDPENN GLYNLRGNAY 180
  181 LRKGDYDQAI TSYSQAIFLD SQDPNQYFNL GLAWTTKGNL ERAIADYSQA ISLDANHAEA 240
  241 YRWRADAWVK RGDTDQALSD YTEAIRLDPG DAETFRNRAR IWERKRDYDR AIADYDQAIA 300
  301 FAPNDAVAYN GRGWMWSLKH ETDRAIVDYV KATAFDPNYV LAYDNLGLAW WDKGDLDRAI 360
  361 SAFDQAVIVD PKYAPAYNDR GLARMDKNQY DLAIADYNMA ILIDAGFVSA YRNRGNAWNR 420
  421 KGQFDYAIAD FDQAIDHDPD DADAYVGRGR SRIYKADYTK AIADLDQAIR IGPKSARAHD 480
  481 TRGLAMVYKA DYAGALADYD EAIRLSPKNA SAYRNRGIAS FYFGPPAKAQ ADFEQAAAIK 540
  541 PGDSYHAIWL DLARRRNGQP SILVDAKLDM TRWPAAVVRL LLGQQTPEAT LLAADNPDAT 600
  601 KKSEQLCEAN FYVAEFQRLQ HHDEEALRLY RLALGGCPRD FIEYTAATSA LRVMGKAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle