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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_NEUCR
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGHFAAVDN GNGSSPDSNA HSFEHGIQVI NEDKQYNTNL NEYLNETHVA EAGFNYHLIS  60
   61 VFGSQSTGKS TLLNHLFGTQ FSVMSERERR QTTKGIWMSK NKNEGKMADN ILVMDVEGTD 120
  121 GRERGEDQDF ERKSALFALA TSEVLIVNIW EHQVGLYQGA NMGLLKTVFE VNMQLFLKDK 180
  181 QNQTRSLLFF VIRDHIGVTP LANLRNTLIQ DLTHIWSSIS KPAGLENSKI EDYFDFAFAA 240
  241 LPHKILQPDK FISEVQNLGS RFIAGHRNKD SDATDDQELT GGVFLPEYHR RIPADGLSIY 300
  301 AEGIWDQIVS NKDLDLPTQQ ELLAQFRCDE IAREVQIAFD AAIAPLEEQQ AESTRAGKPA 360
  361 VLPNLGQIGA EAREKCVKNF ETQASRYHKG VYTTKRAELE DKIDNRLKAL YQAHLTAAHK 420
  421 AGVTAFSEAV ANAVKAGQKA GGAYEFAEIV EKQKTKTLEI FKKEAQSLAI PGVAWSNFKP 480
  481 QYLIFEKELD EVSARLRKEE MRRLAIRVER WVKSRLGDAI GLEFNKLGSG RGGSGAPESG 540
  541 EKPATEKDIW DRVWKAFISI VGEAESRFTD RAKSFEASDD EVQVGLWRLR RKSWVALREK 600
  601 IEEEVMESNI LMKLRENFED KFRYDEDGVP RIWRPSDDIE GIYTRAREST LGLVPLLSRF 660
  661 RLTSTSAPPD LIEFVGPQPH GVEPGDEEDL TPIGGVDEDE GKSLEEETTI LSEPKKQDLV 720
  721 VRFKKMADGV YVEAKRSAIG GITQVPLYFY AVLLVLGWNE FVMVLRNPIL FLLLLLISGG 780
  781 TYVAYSLNLL GPMMQMANAA STQGMEIGKA KLRDFLENHE GARGALGMPP KNAQRVESGI 840
  841 SMDTLDSNGK RKETGLGAED DI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle