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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BST1_NEUCR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTRLAGTSE DGHLCPVEAP FPNVDFLLHQ QLQQEQDVYA NSTTNATASP PIAPTSVLPR  60
   61 PSRPSQSSAA ERTSPESPSV RQSPTKRDRN PGPSSISGAG PLNLEHQSPS QQSQNQQQQQ 120
  121 QQQQQQQQQQ QQQQSFYARS RRSGNFNWKL SHSRNGSIEK PPPSFFSSSF SHSPSTPPLS 180
  181 LGAPANGAAH SKEMEKEEEQ KFVGKRPRIR SPWAITFVTL LISILGIGFL ALVLNSSFTR 240
  241 HIDPKGCRMS YMRPGYAKFD DFDTEHTRFA SKYSLYLYRE LGIENDAKVR GVPVLFIPGN 300
  301 AGSYKQVRPI AAEAANYFHD VLQQDESAVK AGARSLDFFT VDFNEDITAF HGQTLLDQAE 360
  361 YLNEAIRYIL SLYLDRTRSD RDPNLPDPTS VIVLGHSMGG VVARTMLIMP NYQANSINTI 420
  421 ITMSAPHARP PVSFDSEIVK TYKDINDYWR RAYSQQWANN NPLWHVTLVS IAGGGLDTVV 480
  481 PSDYASVESL VPDTHGFTVF TTSIPNVWTS MDHAAILWCD QFRKALVKAI FDVVDVNRAA 540
  541 QTKPRADRMR VFKRWFLTGM EEVAEKTVPS KDPSTLLTLE DNLSSVIAQG ERLVLRSLGA 600
  601 SGAVRAHLLP IPPSGSPEAK RFTLLTDHKL DVSSESGRLE VLFCSVFPMQ PGQAVAGFAA 660
  661 QINLAGDSSA STRLACNNAA SDVVTLPASL RSSQYPFSKE GEPPKTHFSY LQYDVEDIAE 720
  721 HQYVAVIEKT HTPTPGFVIA EFSDVSQSHR TRHISLRRLL AFGMKFRLPS SRPMVSELKV 780
  781 PTMQSSLLAY NLEISEQNCG KQQELFAPLI RQYLTEPYES KFFVNAREAA VSIHGVAPYV 840
  841 PPPLKSRSTE DGLSFQFWTD PTCASNINIK MSIDVMGSLG KLYMRYRTVF AAFPLLVVTL 900
  901 VLRKQFRIYD TTGVFISFSE SLDLCLRQSI PLVLAFLTFL SLFIWNSSSS ATANIWNWAN 960
  961 VTSGAIDFHQ NDLLIGTQDP FFWFLVPVIG LICVGICTVF NYMTLTLVHI LSTAVSLLSF1020
 1021 RPGWIRNDER RKALPLPAFY PTSPRRRMVT TAILLVLVST LIPYQFAYLV CCLVQLTTTV1080
 1081 RAQRLASDLR SAANSNFYNY VHSILLLMLW ILPINLPILV VWIHNLAVHW LTPFSSHHNV1140
 1141 LSIMPFIILV ETLTTGKMVP RVNSRFKHFT SVLLFGIALY AAIYGVSYAY MLHYLVNLVA1200
 1201 AWLAIVHSTS DNWSVLSGIK HISCTLFDAG NTNNVGGVNG TNNTMLAEDC KMRKEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle