YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85109821
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHRKNKAVG LAAFDRSRLT SAQYATHGSA LRSSQASALE TQLSVFRSLL QQFAATHAKD  60
   61 IKSNPTFRAQ FARMCAAIGV DPLLASSGHG DSKGKGDSMW AQLLGRTVND FYFELAVRVV 120
  121 EVCGETRGEN GGLIEVGMVR ERVVKGRVEG MGVQGVTEDD ILRAVGTLKP LGSAYSVIKV 180
  181 GSKQYIRSVP KELNTDQSAV LEAAQVLGYV SVSMLMDNLR WTRARAQTAL EDLVGEGMLW 240
  241 VDKQGIEWEY WSPGFMLEGD LPLDGFD

Type	Start	End	Confidence
Signal Peptide	1	22	0.77
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	267	0.99