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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28917298, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLVSDRTP PSSLAWIFPS NDCTTSSSAE SGSPSSSRPN QPAADHHEND NKVPPGTPPS  60
   61 PAAGDHNTKD RGGRTRGRIG KDHHPRSSIL FSVSAQPSRT QRDQDGFELQ PYPQSSRQPH 120
  121 TRTADDTADT NRNPNPPRDR AAAKEEKRAR KRRWLEAQDD MKFSHSIQFN AVPDWSTHYI 180
  181 AYSNLKKLIY QLEKVIHLSS GGDGESRPLI QHEDPEIVFV RALDVELEKV LSFYTVKERE 240
  241 LFEEVQNVLR DVDAFDEQSG DTDQERQLRP PTRGSEQQRP LRARSESLPS RASTDEGSNS 300
  301 DQSDNENTGL NTRGKQRRLS PGRRKSSTVI PGHMMSSIGD MTASTEMTRS RRFSTTFDDD 360
  361 YAEQAVLFSS GIMLKKRIIN LYVQLCELKS YIQLNRTGFS KVLKKFDKII DRQLRSKYMD 420
  421 TFVDTAYAFR PETTKTLEEQ IHLMVHAYMD IVTQGDEAAA TRDLRSHLRE HVVWERNTVW 480
  481 RELIGMERRA EAASLGHTLL GRDTDPTSHR LQGDDELMLP TKEIATPLGR FRLPAWLVSS 540
  541 TLMTLVIIFA IFFALLFIPI MKKPEQQNCL ALLVFVSLLW ATEAIPLFVT SLTIPFLCVV 600
  601 LRVFRDADKP HHRLGAKATT DAVFSAMWTP VIMLLLGGFT LAAALSKCGI DKRIATFVLS 660
  661 KAGTQPRTVL IANMAVAAFA SMLISNVAAP VLCFGIIEPM LRNLPAGSNM SKAVIMGIAL 720
  721 ASNVGGMLSP IASPQNIVAI GLMEPPPTWG EWFFIVIPVG VISLLLIWVL LLLTFQPGKG 780
  781 TSIVPIRPVK DRFTGVQWFV TLVTVATIGL WCASHQLEAE FGHMGVIAII PIVLFFGVGI 840
  841 LTKEDFNNFP WTIIILAAGG LALGKAVNSS GLLHTVTRLI TEDVQDFSLY GVLIVFSSLI 900
  901 LVIATFISHT VAALIILPLV YDVGKGLDEP HPNLLVMAGV LMCSAAMALP TSGFPNMTAI 960
  961 MKEDPAGQRY LQVKHFISRG VPSSLLTLLV TVTVGYAAMR VVELGW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle